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<h1>SOM Analyst 1.0</h1>
<p>Contents:</p>
<div class="toctree-wrapper compound">
<ul>
<li class="toctree-l1"><a class="reference internal" href="source/install.html">Quick Start Guide</a><ul>
<li class="toctree-l2"><a class="reference internal" href="source/install.html#install-and-update">Install and Update</a><ul>
<li class="toctree-l3"><a class="reference internal" href="source/install.html#direct-download">Direct Download</a></li>
<li class="toctree-l3"><a class="reference internal" href="source/install.html#svn-client">SVN Client</a></li>
<li class="toctree-l3"><a class="reference internal" href="source/install.html#standalone-gui">Standalone GUI</a></li>
<li class="toctree-l3"><a class="reference internal" href="source/install.html#arcgis-gui">ArcGIS GUI</a></li>
</ul>
</li>
<li class="toctree-l2"><a class="reference internal" href="source/install.html#updates">Updates</a></li>
</ul>
</li>
<li class="toctree-l1"><a class="reference internal" href="source/soms.html">Self-Organizing Maps</a><ul>
<li class="toctree-l2"><a class="reference internal" href="source/soms/introduction.html">Introduction</a><ul>
<li class="toctree-l3"><a class="reference internal" href="source/soms/introduction.html#method">Method</a></li>
<li class="toctree-l3"><a class="reference internal" href="source/soms/introduction.html#overview-of-parameters">Overview of Parameters</a><ul>
<li class="toctree-l4"><a class="reference internal" href="source/soms/introduction.html#dimensions-of-the-som">Dimensions of the SOM</a></li>
</ul>
</li>
<li class="toctree-l3"><a class="reference internal" href="source/soms/introduction.html#characteristics-of-som-training">Characteristics of SOM Training</a><ul>
<li class="toctree-l4"><a class="reference internal" href="source/soms/introduction.html#run-length">Run Length</a></li>
<li class="toctree-l4"><a class="reference internal" href="source/soms/introduction.html#neighborhood-size">Neighborhood Size</a></li>
<li class="toctree-l4"><a class="reference internal" href="source/soms/introduction.html#learning-rate">Learning Rate</a></li>
</ul>
</li>
<li class="toctree-l3"><a class="reference internal" href="source/soms/introduction.html#choosing-parameters">Choosing Parameters</a></li>
</ul>
</li>
</ul>
</li>
<li class="toctree-l1"><a class="reference internal" href="source/arcgis.html">SOM Analyst</a><ul>
<li class="toctree-l2"><a class="reference internal" href="source/requirements.html">System Requirements</a></li>
<li class="toctree-l2"><a class="reference internal" href="source/arcgis/tbDataPreprocessing.html">Data Preprocessing</a><ul>
<li class="toctree-l3"><a class="reference internal" href="source/arcgis/tbFileFormatConversion.html">File Format Conversions</a><ul>
<li class="toctree-l4"><a class="reference internal" href="source/arcgis/uiToXbase.html">Conversion to Database File</a><ul>
<li class="toctree-l5"><a class="reference internal" href="source/arcgis/uiToXbase.html#arcgis-reference">ArcGIS Reference</a></li>
<li class="toctree-l5"><a class="reference internal" href="source/arcgis/uiToXbase.html#module-uiToXbase">Code Reference</a></li>
</ul>
</li>
<li class="toctree-l4"><a class="reference internal" href="source/arcgis/uiDBFtoDAT.html">Database File to SOM Data File</a><ul>
<li class="toctree-l5"><a class="reference internal" href="source/arcgis/uiDBFtoDAT.html#arcgis-reference">ArcGIS Reference</a></li>
<li class="toctree-l5"><a class="reference internal" href="source/arcgis/uiDBFtoDAT.html#module-uiDBFtoDAT">Code Reference</a></li>
</ul>
</li>
</ul>
</li>
<li class="toctree-l3"><a class="reference internal" href="source/arcgis/tbDataManagement.html">Data Management</a><ul>
<li class="toctree-l4"><a class="reference internal" href="source/arcgis/uiDBFmerge.html">Combine</a><ul>
<li class="toctree-l5"><a class="reference internal" href="source/arcgis/uiDBFmerge.html#arcgis-reference">ArcGIS Reference</a></li>
<li class="toctree-l5"><a class="reference internal" href="source/arcgis/uiDBFmerge.html#module-uiDBFmerge">Code Reference</a></li>
</ul>
</li>
<li class="toctree-l4"><a class="reference internal" href="source/arcgis/uiSelect.html">Select Data</a><ul>
<li class="toctree-l5"><a class="reference internal" href="source/arcgis/uiSelect.html#arcgis-reference">ArcGIS Reference</a></li>
<li class="toctree-l5"><a class="reference internal" href="source/arcgis/uiSelect.html#module-uiSelect">Code Reference</a></li>
</ul>
</li>
</ul>
</li>
<li class="toctree-l3"><a class="reference internal" href="source/arcgis/tbValueTransformations.html">Value Transformations</a><ul>
<li class="toctree-l4"><a class="reference internal" href="source/arcgis/uiNormMinMax.html">Minimum-Maximum Normalization</a><ul>
<li class="toctree-l5"><a class="reference internal" href="source/arcgis/uiNormMinMax.html#arcgis-reference">ArcGIS Reference</a></li>
<li class="toctree-l5"><a class="reference internal" href="source/arcgis/uiNormMinMax.html#module-uiNormMinMax">Code Reference</a></li>
</ul>
</li>
<li class="toctree-l4"><a class="reference internal" href="source/arcgis/uiNormVar.html">Normalize by Variable</a><ul>
<li class="toctree-l5"><a class="reference internal" href="source/arcgis/uiNormVar.html#arcgis-reference">ArcGIS Reference</a></li>
<li class="toctree-l5"><a class="reference internal" href="source/arcgis/uiNormVar.html#module-uiNormVar">Code Reference</a></li>
</ul>
</li>
<li class="toctree-l4"><a class="reference internal" href="source/arcgis/uiNormZ.html">Z-Score Normalization</a><ul>
<li class="toctree-l5"><a class="reference internal" href="source/arcgis/uiNormZ.html#arcgis-reference">ArcGIS Reference</a></li>
<li class="toctree-l5"><a class="reference internal" href="source/arcgis/uiNormZ.html#module-uiNormZ">Code Reference</a></li>
</ul>
</li>
</ul>
</li>
</ul>
</li>
<li class="toctree-l2"><a class="reference internal" href="source/arcgis/tbSOMcomputation.html">SOM Computation</a><ul>
<li class="toctree-l3"><a class="reference internal" href="source/arcgis/uiMapInit.html">Create Initial SOM</a><ul>
<li class="toctree-l4"><a class="reference internal" href="source/arcgis/uiMapInit.html#arcgis-reference">ArcGIS Reference</a></li>
<li class="toctree-l4"><a class="reference internal" href="source/arcgis/uiMapInit.html#module-uiMapInit">Code Reference</a></li>
</ul>
</li>
<li class="toctree-l3"><a class="reference internal" href="source/arcgis/uiVsom.html">Train SOM</a><ul>
<li class="toctree-l4"><a class="reference internal" href="source/arcgis/uiVsom.html#arcgis-reference">ArcGIS Reference</a></li>
<li class="toctree-l4"><a class="reference internal" href="source/arcgis/uiVsom.html#module-uiVsom">Code Reference</a></li>
</ul>
</li>
<li class="toctree-l3"><a class="reference internal" href="source/arcgis/uiVisual.html">Calculate Best Matching Units</a><ul>
<li class="toctree-l4"><a class="reference internal" href="source/arcgis/uiVisual.html#arcgis-reference">ArcGIS Reference</a></li>
<li class="toctree-l4"><a class="reference internal" href="source/arcgis/uiVisual.html#module-uiVisual">Code Reference</a></li>
</ul>
</li>
<li class="toctree-l3"><a class="reference internal" href="source/arcgis/uiUmatrix.html">Calculate U-Matrix</a><ul>
<li class="toctree-l4"><a class="reference internal" href="source/arcgis/uiUmatrix.html#arcgis-reference">ArcGIS Reference</a></li>
<li class="toctree-l4"><a class="reference internal" href="source/arcgis/uiUmatrix.html#module-uiUmatrix">Code Reference</a></li>
</ul>
</li>
</ul>
</li>
<li class="toctree-l2"><a class="reference internal" href="source/arcgis/tbSOMvisualization.html">SOM Visualization</a><ul>
<li class="toctree-l3"><a class="reference internal" href="source/arcgis/uiCODtoSHP.html">SOM to Shapefile</a><ul>
<li class="toctree-l4"><a class="reference internal" href="source/arcgis/uiCODtoSHP.html#arcgis-reference">ArcGIS Reference</a></li>
<li class="toctree-l4"><a class="reference internal" href="source/arcgis/uiCODtoSHP.html#module-uiCODtoSHP">Code Reference</a></li>
</ul>
</li>
<li class="toctree-l3"><a class="reference internal" href="source/arcgis/uiBMUtoSHP.html">Best Matching Unit to Shapefile</a><ul>
<li class="toctree-l4"><a class="reference internal" href="source/arcgis/uiBMUtoSHP.html#arcgis-reference">ArcGIS Reference</a></li>
<li class="toctree-l4"><a class="reference internal" href="source/arcgis/uiBMUtoSHP.html#module-uiBMUtoSHP">Code Reference</a></li>
</ul>
</li>
<li class="toctree-l3"><a class="reference internal" href="source/arcgis/uiGroup.html">Group Shapes</a><ul>
<li class="toctree-l4"><a class="reference internal" href="source/arcgis/uiGroup.html#arcgis-reference">ArcGIS Reference</a></li>
<li class="toctree-l4"><a class="reference internal" href="source/arcgis/uiGroup.html#module-uiGroup">Code Reference</a></li>
</ul>
</li>
</ul>
</li>
<li class="toctree-l2"><a class="reference internal" href="source/arcgis/tbUtilities.html">Utilities</a><ul>
<li class="toctree-l3"><a class="reference internal" href="source/arcgis/uiExtent.html">Create Extent</a><ul>
<li class="toctree-l4"><a class="reference internal" href="source/arcgis/uiExtent.html#arcgis-reference">ArcGIS Reference</a></li>
<li class="toctree-l4"><a class="reference internal" href="source/arcgis/uiExtent.html#module-uiExtent">Code Reference</a></li>
</ul>
</li>
<li class="toctree-l3"><a class="reference internal" href="source/arcgis/uiEmailMe.html">Send Email</a><ul>
<li class="toctree-l4"><a class="reference internal" href="source/arcgis/uiEmailMe.html#arcgis-reference">ArcGIS Reference</a></li>
<li class="toctree-l4"><a class="reference internal" href="source/arcgis/uiEmailMe.html#module-uiEmailMe">Code Reference</a></li>
</ul>
</li>
</ul>
</li>
</ul>
</li>
<li class="toctree-l1"><a class="reference internal" href="source/arcgis/tutorial.html">Tutorial</a><ul>
<li class="toctree-l2"><a class="reference internal" href="source/arcgis/tutorial.html#system-requirements">System Requirements</a></li>
<li class="toctree-l2"><a class="reference internal" href="source/arcgis/tutorial.html#download">Download</a></li>
<li class="toctree-l2"><a class="reference internal" href="source/arcgis/tutorial.html#adding-the-toolbox">Adding the Toolbox</a></li>
<li class="toctree-l2"><a class="reference internal" href="source/arcgis/tutorial.html#convert-data-format">Convert Data Format</a></li>
<li class="toctree-l2"><a class="reference internal" href="source/arcgis/tutorial.html#normalize-data">Normalize Data</a></li>
<li class="toctree-l2"><a class="reference internal" href="source/arcgis/tutorial.html#select-variables">Select Variables</a></li>
<li class="toctree-l2"><a class="reference internal" href="source/arcgis/tutorial.html#export-data">Export Data</a></li>
<li class="toctree-l2"><a class="reference internal" href="source/arcgis/tutorial.html#create-initial-som">Create Initial SOM</a></li>
<li class="toctree-l2"><a class="reference internal" href="source/arcgis/tutorial.html#train-som">Train SOM</a></li>
<li class="toctree-l2"><a class="reference internal" href="source/arcgis/tutorial.html#calculate-u-matrix">Calculate U-Matrix</a></li>
<li class="toctree-l2"><a class="reference internal" href="source/arcgis/tutorial.html#project-data-onto-som">Project Data onto SOM</a></li>
<li class="toctree-l2"><a class="reference internal" href="source/arcgis/tutorial.html#create-som-shapefile">Create SOM Shapefile</a></li>
<li class="toctree-l2"><a class="reference internal" href="source/arcgis/tutorial.html#create-data-shapefile">Create Data Shapefile</a></li>
<li class="toctree-l2"><a class="reference internal" href="source/arcgis/tutorial.html#group-data-shapefile">Group Data Shapefile</a></li>
<li class="toctree-l2"><a class="reference internal" href="source/arcgis/tutorial.html#create-extent-shapefile">Create Extent Shapefile</a></li>
<li class="toctree-l2"><a class="reference internal" href="source/arcgis/tutorial.html#visualization">Visualization</a></li>
</ul>
</li>
</ul>
</div>
</div>
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<h1>Indices and tables</h1>
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